PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc051648.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family Nin-like
Protein Properties Length: 330aa    MW: 36710.8 Da    PI: 10.5593
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc051648.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK25.72.3e-0875117446
                 RWP-RK   4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPh 46 
                            +++++ + ++  +p  +AA + gv+ T+LK   R++G++ WP 
  Cse_sc051648.1_g010.1  75 SVKMKAVGQHVGKPTGQAAESFGVSRTTLKCFGREHGMPSWPL 117
                            678999999*********************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    
YMDMMNSLIH SVDSSFGSRS DSSQSSVNNE AIVARDDVNT TINRYASMQI TNDGGEKNNR  60
LERGRRSRKI LKIHSVKMKA VGQHVGKPTG QAAESFGVSR TTLKCFGREH GMPSWPLPKH  120
GERTVVVTDS KLSQKPQSKQ NLQQSSNGSV DLFGAVLLLS HLQFVHCIYV VGVSKLTGMS  180
SNLGMQWWSY RKSLKSIQAD VVTSTSEEAP TSIFAATSEP FPTTNVTHDR PTFVLHQQQT  240
NLPDGLAQFK AIKREQFIEN ATASAVKKLT IKATYKENMV KFPFTLLDGL EKLNEMVATR  300
FQLRLGSFKL NFAFSSTRAS QRAKVCPKWS