PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc051294.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | bHLH | ||||||||
Protein Properties | Length: 190aa MW: 21500.7 Da PI: 10.1101 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 37.1 | 5.8e-12 | 29 | 72 | 6 | 54 |
HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+r+N++++ Lr+++P + K++ +iL ++eY+k+L Cse_sc051294.1_g010.1 29 LMAERRRRKRLNDRLSMLRSIVPRiS------KMDRTSILGDTIEYMKDL 72 589*********************66......****************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 190 aa Download sequence |
MISTTPNVFN IGEKKSKSKN VQGQPSKNLM AERRRRKRLN DRLSMLRSIV PRISKMDRTS 60 ILGDTIEYMK DLMEKIRSLK EQDTGLDSSS LNELKVNQTQ ERNSPKFEVE RRNIDTRIQI 120 CCAPKPGLLF SNVNTIESLG LDIRQCVISS FGDFTLHASC YEAQGNQVLA SSEEIKQILF 180 KNAGYGGRGL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 32 | 39 | ERRRRKRL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G65640.1 | 4e-72 | bHLH family protein |