PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc049571.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family WRKY
Protein Properties Length: 205aa    MW: 23149.9 Da    PI: 6.5133
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc049571.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY103.98.8e-3375133159
                            ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                   WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                            +dDgy+WrKYGqK+v+ +++prsYY+Ctsa+Cpv+k+ver+++dpk v++tYeg+Hnh+
  Cse_sc049571.1_g010.1  75 MDDGYRWRKYGQKVVRCNPNPRSYYKCTSAECPVRKHVERASHDPKSVITTYEGKHNHD 133
                            59********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    
MEENQDKVLY VPAQAGATDL DVTLPQLNIT NNEVVDDLDL KRRRTNIDTL DVTPVIKPIR  60
EPRLVVQTIS EVDIMDDGYR WRKYGQKVVR CNPNPRSYYK CTSAECPVRK HVERASHDPK  120
SVITTYEGKH NHDLPAARSS SKDVATQASV KAIGNAMIKT EANDAIFLDL SVENRFSEQQ  180
LQPLNSDTTH SQVHVSNSSF DKVFQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26640.15e-56WRKY family protein