PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc048781.1_g020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | WRKY | ||||||||
Protein Properties | Length: 230aa MW: 25277.6 Da PI: 10.6225 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 77.9 | 1.1e-24 | 157 | 215 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D y+W+KYG K++ gs +pr YY+C + gCp++k+ve s +d k++++tY geH+h+ Cse_sc048781.1_g020.1 157 ADDYSWKKYGEKKIDGSIYPRVYYKCNTGkGCPARKRVELSLDDSKMLVVTYDGEHRHH 215 69************************8776****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 230 aa Download sequence |
MAVDCVGQTV DHLHQMFQFS SGHDFNLSRA VKRTGHARFR RAPATFSDGP STSSSQSEDN 60 KPQKVTATAT ESPSTSSSSN GKSLGIVAPA PTFSSRKPPL PSTHRKRCNT DVNSVNRSGS 120 VSRSGCHCCK RRKMSSSSKR EIRRVPIIGS KITSIPADDY SWKKYGEKKI DGSIYPRVYY 180 KCNTGKGCPA RKRVELSLDD SKMLVVTYDG EHRHHHAPTP VPMRLTGVVV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G24570.1 | 1e-32 | WRKY family protein |