PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc048415.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 351aa    MW: 39606.4 Da    PI: 8.252
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc048415.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR138.53.9e-1269152279
                   FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek.dgkwevt 79 
                             Y +YA++vGF vrks +k+  rng ++++ +vC++eg  +  + +      ++k++r+++ + t+Cka+++  +   + k+++t
  Cse_sc048415.1_g020.1  69 VYMKYASKVGFVVRKSCQKRL-RNGIVKQKYLVCNREGCIKGIHADtldlenSDKQKRSSNLHITSCKARVMFDLIPgTTKYKLT 152
                            69*************998887.8999************999888878999888899999999**********9998877777765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 351 aa     Download sequence    
MDSVSTTSED IVAPVLSPTS EDIVVTDLPT TSEEIVVSDN VSAKFTEEIV AYEHGDESEA  60
IKIDEFISVY MKYASKVGFV VRKSCQKRLR NGIVKQKYLV CNREGCIKGI HADTLDLENS  120
DKQKRSSNLH ITSCKARVMF DLIPGTTKYK LTNETAKSYI LLLKAFGKAP SIVVTDQDGP  180
MRKAIEEEFV GSKHRLWTWF CQIDTRSSVE GSEVSIVKEK KFVDELMEKK KSKLKEKANN  240
KGEDKDKNEE EPINLNANVE MIPNQYILRR RTKNLIPAGL RNKRNMHSEK NEIVKNYANK  300
ATSIVDHYVE AYCLNPPSKD KLDNLEELVV VPKPPVVVVN NPSIYSAKGC K