PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc048125.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 310aa MW: 35722.4 Da PI: 9.2307

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc048125.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	59.9	7.9e-19	66	160	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.........tekerrtraetrtgCkaklkvkkekdgkwevtk 80 Y++YA e+GF vr+ ++++ +++++f Cskeg+++ + k+ +++ +r r++ rt+Cka++ v ++ +k++v++ Cse_sc048125.1_g010.1 66 AYKDYAAEAGFIVRRGHQTND--GSIVMNKEFLCSKEGTKKVKVKEfdslkdncdAKSVKRIRSKFRTNCKARIYVVRS-GEKYRVKN 150 5*************98877..8889**************9***99888999999********999.9*** PP FAR1 81 leleHnHela 90 + +eHnH ++ Cse_sc048125.1_g010.1 151 FAEEHNHGFF 160 *****986 PP

Sequence ? help Back to Top
Protein Sequence Length: 310 aa Download sequence
MRQNCASNEF VEDENLSAGV NVEENEEVNS PDFFTSTSML IKPVVVKTLV PVEGTLFDSV 60 EEVYKAYKDY AAEAGFIVRR GHQTNDGSIV MNKEFLCSKE GTKKVKVKEF DSLKDNCDAK 120 SVKRIRSKFR TNCKARIYVV RSGEKYRVKN FAEEHNHGFF TAEDRHLQKS HRPMSLAHQY 180 FAIKASNLNI GPCMSFNFIA ELLGGYENIG ATKIDFKNMS RDIYSYIGKY DAQMIIDKFS 240 ILKERDENFT FEFKTNTDDH DFRTCPNNPD RKLLRAKKDI KKSKRTGKKV KRKSNNANAE 300 HGTEEFNFKE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	8e-16	FAR1 family protein