PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc047581.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | FAR1 | ||||||||
Protein Properties | Length: 185aa MW: 21207.4 Da PI: 10.1983 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 50.8 | 5.5e-16 | 45 | 140 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek.dgkwevtkl 81 ++Y++YA+ GF+++ks ++ + ++g + ++ +C+keg +++ + + ++k++r+++ + tg ka++++++++ +gk+++ ++ Cse_sc047581.1_g010.1 45 EMYSTYAEAGGFQIKKSGQRLT-KSGMVQHKYIMCNKEGIPRRINIDtldpqnSDKQKRNTTLHITGSKARIRLELDQvSGKYKLVQF 131 58***************99888.778899***********99877777889888899999999************************* PP FAR1 82 eleHnHela 90 +HnH l Cse_sc047581.1_g010.1 132 IAKHNHVLI 140 ******996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 185 aa Download sequence |
MRSPRPTLYE HAETPGGSIY WEPHVEGICV PEEGKYYDTI EEAIEMYSTY AEAGGFQIKK 60 SGQRLTKSGM VQHKYIMCNK EGIPRRINID TLDPQNSDKQ KRNTTLHITG SKARIRLELD 120 QVSGKYKLVQ FIAKHNHVLI PKEYKHFTKK QRRMTQADKM FIVKAPTNKI GATRAHNFLT 180 SLKGG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 2e-09 | FAR1 family protein |