PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc046150.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | MYB_related | ||||||||
Protein Properties | Length: 111aa MW: 12076.4 Da PI: 6.0872 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 50.4 | 5.1e-16 | 3 | 42 | 6 | 47 |
HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 6 teEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 eE+ +++ a++ +G++ W++Iar ++ gRt++ +k++w++ Cse_sc046150.1_g010.1 3 DEEERIILSAHAIHGNK-WAAIARLLP-GRTDNAIKNHWNST 42 59***************.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 111 aa Download sequence |
MADEEERIIL SAHAIHGNKW AAIARLLPGR TDNAIKNHWN STLRRRGVGS GRFNIGSANS 60 NTLDEVATVS VDRSKASSEE TLLCGDVNSF KCVDGVDVTS DHYGPFMESV M |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G55730.1 | 4e-25 | MYB family protein |