PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Cse_sc045547.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 331aa MW: 37445.4 Da PI: 9.8917 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 55.8 | 1e-17 | 29 | 76 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd +l+ +++q+G g+W++ + + g++R++k+c++rw +yl Cse_sc045547.1_g010.1 29 KGPWTPEEDRKLLSYIQQYGHGSWRSLPTKAGLKRCGKSCRLRWTNYL 76 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 53.5 | 5.4e-17 | 82 | 126 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg ++ eE+ +++++++lG++ W+tIa++++ +Rt++++k++w+++ Cse_sc045547.1_g010.1 82 RGTFSFEEERTIIQLHALLGNR-WSTIAAHLP-RRTDNEIKNHWNSH 126 899*******************.*********.***********987 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 331 aa Download sequence |
MTKSLGRNDK NKKQNNNGNI LGLGIGVKKG PWTPEEDRKL LSYIQQYGHG SWRSLPTKAG 60 LKRCGKSCRL RWTNYLRPDI KRGTFSFEEE RTIIQLHALL GNRWSTIAAH LPRRTDNEIK 120 NHWNSHIKKR MTKMGIDPMT HKPKSGTQLL GTNLNHMAQW EAARLEAEAR LVQKPKNHLN 180 QLSHNHVSPQ SILDLHKTST TLPPQTLPCL DVLKVWQGNL WSNYTINNES LQSLISRPKV 240 SVATLVMPVL NNVESNGTCG QGPTLKHNDQ TETKTGPFDE FEDANDANFI NDDPLRSPEF 300 WEEFVDVLDG GWNSQTNNFA LMASPPASSV F |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G15310.1 | 9e-71 | MYB family protein |