PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc044409.1_g020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | MYB_related | ||||||||
Protein Properties | Length: 165aa MW: 18956.2 Da PI: 6.96 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 40.8 | 5.1e-13 | 16 | 69 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHT.......TTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmg.......kgRtlkqcksrwqk 46 +g W++eEde+lv++++ +G + +W+++++ gRt+ +k++w++ Cse_sc044409.1_g020.1 16 KGLWSPEEDEKLVNYITTYGRHgCWSSVPKLADghessylPGRTDRAVKNFWNS 69 678*****************98******************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 165 aa Download sequence |
MHEGGNRFSN RQKLMKGLWS PEEDEKLVNY ITTYGRHGCW SSVPKLADGH ESSYLPGRTD 60 RAVKNFWNSN TKKKLLQFQL QTVNEQGRRV DAPLPLVKHD QETENEVDLH PLPPSFMKEY 120 FDPILDQNCH PNHLIKQTGS ESDSMNLITN SQPNIQSIGH NFNSI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13890.2 | 8e-20 | MYB family protein |