PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc043599.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NAC
Protein Properties Length: 169aa    MW: 20118.6 Da    PI: 8.7827
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc043599.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM103.72.4e-32161431128
                    NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratk.sgyWka 85 
                            l pGfrF Ptd el+v+yLk+k+++ k + +    ev+iy++ P +L +  ++++ e++wyf ++r++k+++g+r+nr+tk  g+Wka
  Cse_sc043599.1_g010.1  16 LEPGFRFCPTDVELIVYYLKPKIDTGKRHPNCRYYEVNIYDYGPDELTAkpEYRSCENKWYFLTPRERKHPNGNRPNRKTKpGGTWKA 103
                            579*********************9997774569*************84356777889********************877699**** PP

                    NAM  86 tgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                            + + k+  +  +++vg ++ L +    ++kg+kt W+mhey+ 
  Cse_sc043599.1_g010.1 104 SQTGKPQRDDMNRVVGWRTCLFYI---DEKGNKTAWLMHEYTT 143
                            99999999999999*****99998...78999*********85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 169 aa     Download sequence    
MAYYNNQEQH DYADSLEPGF RFCPTDVELI VYYLKPKIDT GKRHPNCRYY EVNIYDYGPD  60
ELTAKPEYRS CENKWYFLTP RERKHPNGNR PNRKTKPGGT WKASQTGKPQ RDDMNRVVGW  120
RTCLFYIDEK GNKTAWLMHE YTTDNPNIPK GSQEQKENNN MVIFYLLKS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61110.11e-27NAC family protein