PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc043223.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | bHLH | ||||||||
Protein Properties | Length: 241aa MW: 27437.7 Da PI: 5.4078 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 30 | 9.5e-10 | 73 | 114 | 9 | 55 |
HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r RR+ri +++ L++l+P +K++ a++Le+Av+Y+k+L+ Cse_sc043223.1_g010.1 73 ARHRRERISERIRILQRLVPGG-----TKMDTASMLEEAVHYMKYLK 114 699*****************87.....8*****************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 241 aa Download sequence |
MDLDKLPDPF SLSFSSTPPP QFRTSFKPDS MEVMREMIFQ MAAMQPVQID PEAVRPPKRR 60 NVKISKDPQS VAARHRRERI SERIRILQRL VPGGTKMDTA SMLEEAVHYM KYLKKQVQSL 120 EQGAAGGMAM VPMNKKVNVG GGYLLHNQYE TSCWTPNFAS DVDDSDEEES VDNACTEDSD 180 KNEDNEVESV GEFIHTEDNK VNHDQVEEGN IQPNDSDPHY YKKSHRNRSK WPMKSGFGTT 240 L |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 55 | 60 | RPPKRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G67060.1 | 4e-38 | bHLH family protein |