PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc042616.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

WRKY

Protein Properties

Length: 594aa MW: 66670 Da PI: 6.3712

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc042616.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	103.1	1.6e-32	211	267	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +DgynWrKYGqK+vkgse+prsYY+Ct+++C+vkkkvers+ d++++ei+Y+g Hnh+ Cse_sc042616.1_g010.1 211 EDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCQVKKKVERSH-DGHITEIIYKGAHNHQ 267 7**************************************.*************7 PP
2	WRKY	105.2	3.4e-33	403	461	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct++gCpv+k+ver+++d k v +tYeg+Hnh Cse_sc042616.1_g010.1 403 LDDGYRWRKYGQKVVKGNPNPRSYYKCTTTGCPVRKHVERASDDLKSVLTTYEGKHNHA 461 59********************************************************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 594 aa Download sequence
MCIQNNEGEF GDDDEWGDLI ATPNRLIADE FFVLKDEYID EKFRVVEKSG GDDKIRVLDP 60 SDTGWSQMLT IPPGISSALL LDPMSMIPNS QESSATGTFM LPPMNHESFG MNSAFDDSSC 120 DSNSFTYQQP NEGSLLWPCI SELQNQPQVP SGIPMELSKE TITKHSATAL HSHTNKRKFP 180 IIQPKNENDP KRRPSDGYPK ETSLPPMRNS EDGYNWRKYG QKQVKGSEYP RSYYKCTHPN 240 CQVKKKVERS HDGHITEIIY KGAHNHQGQR NTNIGSNDAN SSYIKYEDGE LWENVQQGGN 300 NNNSNCQIQD GIDMSSLTSV AIDNHDLISS TQGKSTGVIG NVERNGNYNA SDADGTRVDE 360 GDEDKSDLKR RKKGNFLMET SLVTRAMREP RVVVQIESEV DILDDGYRWR KYGQKVVKGN 420 PNPRSYYKCT TTGCPVRKHV ERASDDLKSV LTTYEGKHNH AIPAARNSNH ANMDVGSTSN 480 PPNSLRLPKI TNVPKPEPQV QDHPLISSNF LTGPTKYGHY QNMLLPEFPI SLPMPPPNAN 540 IMNGFGYSNN GNNGRFIKPK MERDDGYYDT FMRAPDHVTD ASSRYCRVIP NFPS

Sequence ? help Back to Top

Protein Sequence Length: 594 aa Download sequence

MCIQNNEGEF GDDDEWGDLI ATPNRLIADE FFVLKDEYID EKFRVVEKSG GDDKIRVLDP  60
SDTGWSQMLT IPPGISSALL LDPMSMIPNS QESSATGTFM LPPMNHESFG MNSAFDDSSC  120
DSNSFTYQQP NEGSLLWPCI SELQNQPQVP SGIPMELSKE TITKHSATAL HSHTNKRKFP  180
IIQPKNENDP KRRPSDGYPK ETSLPPMRNS EDGYNWRKYG QKQVKGSEYP RSYYKCTHPN  240
CQVKKKVERS HDGHITEIIY KGAHNHQGQR NTNIGSNDAN SSYIKYEDGE LWENVQQGGN  300
NNNSNCQIQD GIDMSSLTSV AIDNHDLISS TQGKSTGVIG NVERNGNYNA SDADGTRVDE  360
GDEDKSDLKR RKKGNFLMET SLVTRAMREP RVVVQIESEV DILDDGYRWR KYGQKVVKGN  420
PNPRSYYKCT TTGCPVRKHV ERASDDLKSV LTTYEGKHNH AIPAARNSNH ANMDVGSTSN  480
PPNSLRLPKI TNVPKPEPQV QDHPLISSNF LTGPTKYGHY QNMLLPEFPI SLPMPPPNAN  540
IMNGFGYSNN GNNGRFIKPK MERDDGYYDT FMRAPDHVTD ASSRYCRVIP NFPS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G26440.1	1e-81	WRKY family protein