PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc041909.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NAC
Protein Properties Length: 314aa    MW: 35941.1 Da    PI: 5.7858
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc041909.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM171.62.4e-5361331128
                    NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkat 86 
                            lppGfrFhPtdeel+ +yL++k++g ++el evi+ +++yk++PwdLp k  + +++ ew+fF++rd+ky++g+r+nrat++gyWkat
  Cse_sc041909.1_g020.1   6 LPPGFRFHPTDEELIGYYLRRKLQGLQIEL-EVIPVIELYKFDPWDLPeKsYLPKHDMEWFFFCPRDRKYPNGSRTNRATNAGYWKAT 92 
                            79****************************.99**************94335555788****************************** PP

                    NAM  87 gkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                            gkd++vls ++++ g +ktLvfy+grap g++t+Wvmheyrl
  Cse_sc041909.1_g020.1  93 GKDRKVLS-QSSVLGYRKTLVFYRGRAPFGNRTSWVMHEYRL 133
                            ********.9999***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MGDTSLPPGF RFHPTDEELI GYYLRRKLQG LQIELEVIPV IELYKFDPWD LPEKSYLPKH  60
DMEWFFFCPR DRKYPNGSRT NRATNAGYWK ATGKDRKVLS QSSVLGYRKT LVFYRGRAPF  120
GNRTSWVMHE YRLRDDVSIG IPSFQGPFTL CRVIKKNEQK TSYANNEPRT KGIGRSSNYA  180
NDPIGSESNF STPLTYPYQT TPISIEQSSS TCPIDPPSIC VSPALILDSS KEQLEQGQER  240
QCGSYQLNEF TNPTIPLHKY DKFGFSPSSS YSNFSEEDDI IRFGCMSPYS GDENLMGLFG  300
NEDPMSNEGY DWSN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17980.14e-89NAC family protein