PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc040406.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family WRKY
Protein Properties Length: 352aa    MW: 39203.8 Da    PI: 8.5453
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc040406.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY39.31.3e-126442159
                           -EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                   WRKY 21 prsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
                            r+YY+C s+gCpv+k++e   +  + v+itY+g H+h+
  Cse_sc040406.1_g010.1  6 FRNYYKCISTGCPVRKHIENVVDGSSEVTITYKGLHDHD 44
                           59********************9999************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 352 aa     Download sequence    
MDYVYFRNYY KCISTGCPVR KHIENVVDGS SEVTITYKGL HDHDMPVPRK GQGPPSDVLI  60
TAVSSASQNT SQPTRRESAP TLLSIELVNV EGYNDWIRLV VEFTLKSLQS WQVHKDPKAP  120
FLMSGCKVAD GAGTMLVWNL YKSLLVKFAY PSRFESVIFE VFNLKVPVGS IVALVGGSGS  180
GKSTVIALLQ RFMILKGDEI SIDGVRVDKL QLKWLRSQMG LMSQEPALSA TTIKENILFG  240
KENATMEEVI KAAKALNAHN FISQLPRAYE TQVGTHAQQR MRTHQPLHKK VQVVQGKHNG  300
SVYVFGCGGN DTNTNGYEVD AGSVEQAWLA KSQSDYMLRD PSTYEWMQSD YI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G30935.16e-22WRKY family protein