PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc040030.1_g020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | WRKY | ||||||||
Protein Properties | Length: 142aa MW: 16415.6 Da PI: 8.626 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 32.4 | 1.8e-10 | 22 | 43 | 1 | 22 |
---SS-EEEEEEE--TT-SS-E CS WRKY 1 ldDgynWrKYGqKevkgsefpr 22 l+Dgy+WrKYGqKe+ ++++pr Cse_sc040030.1_g020.1 22 LNDGYSWRKYGQKEILNAKYPR 43 58*******************9 PP | |||||||
2 | WRKY | 29.4 | 1.5e-09 | 65 | 101 | 25 | 59 |
EEE-ST..T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 25 YrCtsa..gCpvkkkversaedpkvveitYegeHnhe 59 Y t+a +C+++k+v+r +edp+++e++++g+H+++ Cse_sc040030.1_g020.1 65 YLPTYAwlSCNATKQVQRPDEDPSIFEVIFRGQHTCP 101 555666679**************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 142 aa Download sequence |
NRIIRPKHQL RVSKGIEFEK LLNDGYSWRK YGQKEILNAK YPRYIHSLFL TAHNSILLRH 60 NKHVYLPTYA WLSCNATKQV QRPDEDPSIF EVIFRGQHTC PTVLSNNCSS TPTESIETNS 120 ASLITASHME QAEWLSLLCS NE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G24110.1 | 1e-18 | WRKY family protein |