PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc039958.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family LBD
Protein Properties Length: 328aa    MW: 36316.2 Da    PI: 8.405
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc039958.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260989.9e-3170173199
                 DUF260   1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilkl 83 
                            +C++C+vlr++C++dC ++p++     p++q++++ +++k++G++ +++l++a pe+ r+++++sl+yeA+ r+ +P+yG+vg+++++
  Cse_sc039958.1_g010.1  70 SCNGCRVLRKGCSDDCNIRPCLqwiksPESQANATVFLAKFYGRAGLMNLVSAGPEHLRPAIFRSLLYEACGRIVNPIYGSVGLLWSG 157
                            6*************************************************************************************** PP

                 DUF260  84 qqqleqlkaelallke 99 
                            ++q++q ++e++l ++
  Cse_sc039958.1_g010.1 158 RWQMCQDAVEAVLKGS 173
                            *********9988766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    
MNVENLVVLY KSHILPVSWK QLRPPKNPAA IHKPYIYKPT HPTQTYHPKK TYSPFTPNNI  60
KRNLTTMRMS CNGCRVLRKG CSDDCNIRPC LQWIKSPESQ ANATVFLAKF YGRAGLMNLV  120
SAGPEHLRPA IFRSLLYEAC GRIVNPIYGS VGLLWSGRWQ MCQDAVEAVL KGSPIVQVAS  180
DAEETTHAPP LKAYDIRHVS KDEPSDGSKT NELHKIRSRC RFKKTSGSKE NKKNRVGSDE  240
ESGRASSDHE STLSHQSETA AHVVESDSQM TVADVSGEGP VKSEVELELT LGFEPVQRSW  300
SCEPAGKAAG GFDDSGEGVC RMELALDY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G02550.11e-100LBD family protein