PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc039722.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | WRKY | ||||||||
Protein Properties | Length: 218aa MW: 24002.9 Da PI: 10.512 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 70.9 | 1.7e-22 | 151 | 208 | 2 | 58 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnh 58 D y+W+KYG K +gs++p YY+C + gCp++k+ve + +dpk++ +tY geH h Cse_sc039722.1_g010.1 151 ADDYTWKKYGEKRREGSPYPSVYYKCNTGkGCPARKRVEITLDDPKMLLVTYAGEHVH 208 69************************8776**************************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 218 aa Download sequence |
MAVDYITSQT TPVKRTGHAR FRRAPSDSNG PSTSTQSAPV KLQSTEQSTS YTTSSSTSSR 60 STNSSSFLLS PGEEESVSNG KRFSFLGVVS PVPTFSARKP PLPSSHRKRC AVDRPTRSEN 120 NSGCHCCKRR KTTSKRETRR VPITGSNTIP ADDYTWKKYG EKRREGSPYP SVYYKCNTGK 180 GCPARKRVEI TLDDPKMLLV TYAGEHVHGH APVLSVQL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G31550.1 | 4e-28 | WRKY family protein |