PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc039073.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

WRKY

Protein Properties

Length: 467aa MW: 52891.5 Da PI: 6.7544

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc039073.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	59.8	5e-19	123	183	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 dDg++WrKYGqKe+ ++++ r+YYrC ++ gC+++k+v++ +++p +itY+ +H+++ Cse_sc039073.1_g020.1 123 DDGHSWRKYGQKEIINATHKRNYYRCCHKfeqGCQATKQVQKIQDEPPKYKITYNRHHTCK 183 8*************************9999*************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 467 aa Download sequence
MESFSWLESS SSNQIESIQD LTHVQQFTDD ISEMPWLSEN IEVDHATINR VAVERLETFS 60 ITPSIRSNYN AAVNDISPLY SLDGWSSKDV NHMVKPAKPV KSKRGCYIRR SSWTSTNITS 120 YTDDGHSWRK YGQKEIINAT HKRNYYRCCH KFEQGCQATK QVQKIQDEPP KYKITYNRHH 180 TCKNFLSTPQ VFLDSTNDND TSVLLGFENN GASFSLDKHE EPNDGFSSLD SSYNQASSFD 240 YNQSHNLIMS DSSRLVSQIS SRLDHEEVIL TRVYSPIYER GQMFDAIGCM NAENTLKDSM 300 VTGMPNLDDE GYLYEKITIE HEWTPPRCAS CRIFGHNSEH CHNLVPSKST NHGEVRTDST 360 KMNRSNTENG GKKQAGRNYR YSTKHKLIYM PMLNTSSPNK NMQASKSNTE DNEGTKERSS 420 TSTSTVAARV TSTSKGVTPY IAIPVDVEQL ANEEPIPNLS TTAKVVK

Sequence ? help Back to Top

Protein Sequence Length: 467 aa Download sequence

MESFSWLESS SSNQIESIQD LTHVQQFTDD ISEMPWLSEN IEVDHATINR VAVERLETFS  60
ITPSIRSNYN AAVNDISPLY SLDGWSSKDV NHMVKPAKPV KSKRGCYIRR SSWTSTNITS  120
YTDDGHSWRK YGQKEIINAT HKRNYYRCCH KFEQGCQATK QVQKIQDEPP KYKITYNRHH  180
TCKNFLSTPQ VFLDSTNDND TSVLLGFENN GASFSLDKHE EPNDGFSSLD SSYNQASSFD  240
YNQSHNLIMS DSSRLVSQIS SRLDHEEVIL TRVYSPIYER GQMFDAIGCM NAENTLKDSM  300
VTGMPNLDDE GYLYEKITIE HEWTPPRCAS CRIFGHNSEH CHNLVPSKST NHGEVRTDST  360
KMNRSNTENG GKKQAGRNYR YSTKHKLIYM PMLNTSSPNK NMQASKSNTE DNEGTKERSS  420
TSTSTVAARV TSTSKGVTPY IAIPVDVEQL ANEEPIPNLS TTAKVVK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56400.1	2e-28	WRKY family protein