PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc037939.1_g040.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

NAC

Protein Properties

Length: 373aa MW: 42480.1 Da PI: 6.7463

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc037939.1_g040.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	170.1	7.2e-53	11	141	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvka.eekewyfFskrdkkyatgkrknratksgyWka 85 +ppGfrFhPtdeel+ +yL+kkv+ + ++l +vi+evd++k+ePwdL+ k ++ + ++ewyfFs++dkky+tg+r+nrat++g+Wka Cse_sc037939.1_g040.1 11 VPPGFRFHPTDEELLYYYLRKKVSYEAIDL-DVIREVDLNKLEPWDLKdKcRIGSgPQNEWYFFSHKDKKYPTGTRTNRATTAGFWKA 97 69**************************.9***********943444443456************************* PP NAM 86 tgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 tg+dk+++ +++ +g++ktLvfy+grap+g+ktdW+mheyrl Cse_sc037939.1_g040.1 98 TGRDKAIHLLsNSKRIGMRKTLVFYTGRAPHGQKTDWIMHEYRL 141 ***98658899*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 373 aa Download sequence
MMNTGNGQLS VPPGFRFHPT DEELLYYYLR KKVSYEAIDL DVIREVDLNK LEPWDLKDKC 60 RIGSGPQNEW YFFSHKDKKY PTGTRTNRAT TAGFWKATGR DKAIHLLSNS KRIGMRKTLV 120 FYTGRAPHGQ KTDWIMHEYR LDDQYSNEAT PSEVQEDGWV VCRVFKKKNH NRSPFQTEDH 180 QDHTFQAEDE HQLLIDQDIS KHGSGLHTLH SYDCNNIASN TTLFDGSMHL PQLMTPHDHG 240 PYFLAQRQGA HLVNNNENNE TSTLMMSNMD SSRNLLSLMS ASQGACGCNS GHPSEDKPLL 300 ATSSVTADWS FLDKLLATNQ HPAAVAFDHH SQQGTCHDPS SSQPFHHPDV NASSHIFPFH 360 YLGYETDILK YSK

Sequence ? help Back to Top

Protein Sequence Length: 373 aa Download sequence

MMNTGNGQLS VPPGFRFHPT DEELLYYYLR KKVSYEAIDL DVIREVDLNK LEPWDLKDKC  60
RIGSGPQNEW YFFSHKDKKY PTGTRTNRAT TAGFWKATGR DKAIHLLSNS KRIGMRKTLV  120
FYTGRAPHGQ KTDWIMHEYR LDDQYSNEAT PSEVQEDGWV VCRVFKKKNH NRSPFQTEDH  180
QDHTFQAEDE HQLLIDQDIS KHGSGLHTLH SYDCNNIASN TTLFDGSMHL PQLMTPHDHG  240
PYFLAQRQGA HLVNNNENNE TSTLMMSNMD SSRNLLSLMS ASQGACGCNS GHPSEDKPLL  300
ATSSVTADWS FLDKLLATNQ HPAAVAFDHH SQQGTCHDPS SSQPFHHPDV NASSHIFPFH  360
YLGYETDILK YSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79580.1	1e-100	NAC family protein