PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc037587.1_g020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | NAC | ||||||||
Protein Properties | Length: 257aa MW: 29488.2 Da PI: 7.4316 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 166.3 | 1.1e-51 | 11 | 134 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88 lppGfrFhP+deelv++yL +k++ ++ +l + evd++k+ePwdLp+++ + kewyf+s+rd+kyatg r+nrat sgyWkatgk Cse_sc037587.1_g020.1 11 LPPGFRFHPRDEELVCDYLFNKLSLSDSHL---LVEVDLNKCEPWDLPETACVGGKEWYFYSQRDRKYATGLRTNRATVSGYWKATGK 95 79**********************999666...99*************7777799********************************* PP NAM 89 dkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 d+++++ +++lvg++ktLvfy grapkg+ktdWvmhe+rl Cse_sc037587.1_g020.1 96 DRSIFR-NRTLVGMRKTLVFYLGRAPKGKKTDWVMHEFRL 134 ******.999****************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 257 aa Download sequence |
MSNLSLVEAT LPPGFRFHPR DEELVCDYLF NKLSLSDSHL LVEVDLNKCE PWDLPETACV 60 GGKEWYFYSQ RDRKYATGLR TNRATVSGYW KATGKDRSIF RNRTLVGMRK TLVFYLGRAP 120 KGKKTDWVMH EFRLQGSLAP PVDSSIKEDW VLCRVFCKNN REQVDEKQNS NMGSISEHVG 180 HEDTLSCSSS LPPLMDQPYT FSFDQSQPTN NNNIYNQQQV PCFSNIFNIY SSPQFDLINN 240 NNRHIFTTTG TTIPPPP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G56010.2 | 1e-95 | NAC family protein |