PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc037526.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

bHLH

Protein Properties

Length: 481aa MW: 54918.7 Da PI: 8.4387

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc037526.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	51.2	2.3e-16	105	151	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn+ E+rRR+riN+++ L++l+P++ K +Ka++L +A+eY+k+Lq Cse_sc037526.1_g010.1 105 VHNMSEKRRRSRINEKMKALQKLIPNS-----NKTDKASMLDEAIEYLKQLQ 151 6***********************7.....5****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 481 aa Download sequence
MFDNICSSSY SPMSHEPSDD ISVLLRQILS KSSSSSSSCS LLTKQQQQQQ QPHSADVANV 60 GAIDYDPSDE YDCESQEGFE NLMEEMDGKP NPPRNPSKRM RAAEVHNMSE KRRRSRINEK 120 MKALQKLIPN SNKTDKASML DEAIEYLKQL QLQVQMLTMR NGINLYSMYA PHGGVQPNHR 180 PSNVNQGNHS ITMTANQERL VNPMLGHPIQ CMSQNKQSLL DFSRTINQEP PFGTQLVLTI 240 CEFIFLSEFF QEKAKMNDGD VSRQIQQMVA FIRQEAEEKA NEISVSAEEE FNIQKMQIVD 300 WDKKKIKQDY DRKLKQVEVK KKIEYSMQLN ASRIKFLQAQ DDVVVSMKDA ARKELLNVSS 360 NRKTYKDLIQ SLVVQSLLKL NEPSLVLRCR EIDLTLVESV IEEAKRSYVT KSKLSAPKIN 420 IDRNVFLPPP PSNKDPNRPS CSGGVVLASQ DGKIVFENTL DTRLDVIYHN KLPTIRKILY 480 K

Sequence ? help Back to Top

Protein Sequence Length: 481 aa Download sequence

MFDNICSSSY SPMSHEPSDD ISVLLRQILS KSSSSSSSCS LLTKQQQQQQ QPHSADVANV  60
GAIDYDPSDE YDCESQEGFE NLMEEMDGKP NPPRNPSKRM RAAEVHNMSE KRRRSRINEK  120
MKALQKLIPN SNKTDKASML DEAIEYLKQL QLQVQMLTMR NGINLYSMYA PHGGVQPNHR  180
PSNVNQGNHS ITMTANQERL VNPMLGHPIQ CMSQNKQSLL DFSRTINQEP PFGTQLVLTI  240
CEFIFLSEFF QEKAKMNDGD VSRQIQQMVA FIRQEAEEKA NEISVSAEEE FNIQKMQIVD  300
WDKKKIKQDY DRKLKQVEVK KKIEYSMQLN ASRIKFLQAQ DDVVVSMKDA ARKELLNVSS  360
NRKTYKDLIQ SLVVQSLLKL NEPSLVLRCR EIDLTLVESV IEEAKRSYVT KSKLSAPKIN  420
IDRNVFLPPP PSNKDPNRPS CSGGVVLASQ DGKIVFENTL DTRLDVIYHN KLPTIRKILY  480
K

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36930.1	2e-40	bHLH family protein