PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc037345.1_g030.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | ERF | ||||||||
Protein Properties | Length: 231aa MW: 26214.7 Da PI: 6.2492 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 62.7 | 8.2e-20 | 84 | 133 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+W+AeIrdp + +r++lg+f tae Aa a+++a+++++g Cse_sc037345.1_g030.1 84 HYRGVRQRP-WGKWAAEIRDPQ----KaARVWLGTFETAEAAAIAYDEAALRFKG 133 7********.**********93....36************************988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 231 aa Download sequence |
MFKRKSKKSV RVEEEEDDTF PVYSHQSQED MNAIVSALSQ VIGSDEPTIQ HGDMSSYSST 60 SSNTPNQPPP SIQESPEGNQ RGRHYRGVRQ RPWGKWAAEI RDPQKAARVW LGTFETAEAA 120 AIAYDEAALR FKGNKAKLNF PERVQPGRTE LGYLTTRPQY HQQPPPPQPQ PQYHSGIDPN 180 QFHYPEYMMG GNEMSYNPNI LQSSSSSSTD MQGSSYGFGS MQYWQDYDPR N |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G61890.1 | 1e-37 | ERF family protein |