PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc037178.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family GRAS
Protein Properties Length: 724aa    MW: 82493.7 Da    PI: 5.2271
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc037178.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS357.52e-1093517212373
                   GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsP 89 
                            ++lL++cA+ v+++d++ a++ L++++++ sp+g++ qRla+ f+ +L+a+l++++s+lyk+ ++++ s    +e++ a+++ + vsP
  Cse_sc037178.1_g020.1 351 RTLLIKCAQSVATDDHKVATEQLKQIRQHTSPTGNASQRLAHIFALGLEAHLSGTGSHLYKSQKATQIS---AAEKMRAFQACVSVSP 435
                            789*********************************************************998888888...9*************** PP

                   GRAS  90 ilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvp 175
                            + +     aN++I +a+ +++++HiiDf+i++G+QWp L + La Rp+gpp+lRiTg++ p+ g   ++++eetg+rLa ++e ++vp
  Cse_sc037178.1_g020.1 436 FKQNEIYFANRTIHDAALTSSTLHIIDFGIGYGFQWPVLVKHLAVRPGGPPKLRITGIELPQRGfrPADQVEETGRRLATYCEMFKVP 523
                            **************************************************************99************************ PP

                   GRAS 176 fefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealey 263
                            fe+n+++++++e++++e+++++++E l+Vn+  + ++llde+   +s+rd+vLklv++++P+++v++  + +++++ F++rf eal +
  Cse_sc037178.1_g020.1 524 FEYNAIATHNWEMIKIEDMKLQRNEFLVVNCLARFENLLDETNVKDSPRDRVLKLVRDMKPDLFVHSIVNGSYSAPFFVTRFKEALFH 611
                            *****9999******************************************************************************* PP

                   GRAS 264 ysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrv 351
                            ysalfd+++a++ r++e+r+++E+ ++gre++nv+aceg er+er et+++W+ r+++aGFk+ +++ ++++q k+ ++  + + + +
  Cse_sc037178.1_g020.1 612 YSALFDMFDATIDRDNEQRQNYEKSFFGREVMNVIACEGHERVERPETYKQWQVRISRAGFKARHVDREIVSQLKSKVKVRYHKDFVL 699
                            *******************************************************************************999888*** PP

                   GRAS 352 eeesgslvlgWkdrpLvsvSaW 373
                            +++ +++++gWk+r L ++S+W
  Cse_sc037178.1_g020.1 700 DDDGKWMLQGWKGRILCALSCW 721
                            ********************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 724 aa     Download sequence    
MVMESGIHEY ADYSNGFSWD NENISPGFDQ FSSYANNGYR FRDEPLDLSF LDPPLSVPNK  60
DAGTVTSVIS QINLPEEYED SVSKYLNQIL VEENMESRQS MFHDPFALQA TEQELLEALG  120
KNYPLVQLPV ESPEETFYGS TSEYSTSGSN SSFDPKWVRS ESFETKSSVM LAQSVDYHPL  180
ISPTTSVTND VNDTIDSVIA RHMVQNIFTD SKSILLFKKG MEEATKFLPP NNPLVIDLDR  240
YNLPSDSTNV PPNVVKVENV EMDNGLRGRK HSELEDSDFE DERTTKQSAV YEDEEAELTD  300
IFDKLLRCTN DIGEPMPGFA EVANHNNLKH VYNGWNAPWR TGNANDSIDI RTLLIKCAQS  360
VATDDHKVAT EQLKQIRQHT SPTGNASQRL AHIFALGLEA HLSGTGSHLY KSQKATQISA  420
AEKMRAFQAC VSVSPFKQNE IYFANRTIHD AALTSSTLHI IDFGIGYGFQ WPVLVKHLAV  480
RPGGPPKLRI TGIELPQRGF RPADQVEETG RRLATYCEMF KVPFEYNAIA THNWEMIKIE  540
DMKLQRNEFL VVNCLARFEN LLDETNVKDS PRDRVLKLVR DMKPDLFVHS IVNGSYSAPF  600
FVTRFKEALF HYSALFDMFD ATIDRDNEQR QNYEKSFFGR EVMNVIACEG HERVERPETY  660
KQWQVRISRA GFKARHVDRE IVSQLKSKVK VRYHKDFVLD DDGKWMLQGW KGRILCALSC  720
WVPA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.10.0GRAS family protein