PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc037115.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

NAC

Protein Properties

Length: 350aa MW: 39027.7 Da PI: 8.2242

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc037115.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	173.5	6.4e-54	15	142	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88 lppGfrFhPtdeelvv+yLkk+++++++++ +i+e+d+yk++Pw+Lp+k++ +e+ewyfFs+rd+ky++g r+nra++sgyWkatg+ Cse_sc037115.1_g020.1 15 LPPGFRFHPTDEELVVHYLKKRADSTPIPV-AIIAEIDLYKFDPWELPAKATFGEQEWYFFSPRDRKYPNGARPNRAANSGYWKATGT 101 79**************************.88***********988899****************************** PP NAM 89 dkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 dk+vl++ ++++vg+kk Lvfy g+ pkg+kt+W+mheyrl Cse_sc037115.1_g020.1 102 DKPVLTSgGSQKVGVKKALVFYGGKPPKGVKTNWIMHEYRL 142 *9977888*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 350 aa Download sequence
MESTDSSTGS QLPHLPPGFR FHPTDEELVV HYLKKRADST PIPVAIIAEI DLYKFDPWEL 60 PAKATFGEQE WYFFSPRDRK YPNGARPNRA ANSGYWKATG TDKPVLTSGG SQKVGVKKAL 120 VFYGGKPPKG VKTNWIMHEY RLTDGKSINK PLGCDPTKQK GSLRLDDWVL CRIYKKNNIQ 180 RPVDSDGDHH LHNMNGMLSS IPPSISLGGG HQGTIIKPAS GHMGYNAMLE NHEHNLMFDT 240 RMNSNDADTD TNTNTSNLFP VKRSLPGLFW NEDNTGNSSQ TYTKRFLSES NSSDVSVMAT 300 RTTEENSGSI STLLGQLPQA PQMQQQSMLG SLEDGVFRQP YQLPGMNWYS

Sequence ? help Back to Top

Protein Sequence Length: 350 aa Download sequence

MESTDSSTGS QLPHLPPGFR FHPTDEELVV HYLKKRADST PIPVAIIAEI DLYKFDPWEL  60
PAKATFGEQE WYFFSPRDRK YPNGARPNRA ANSGYWKATG TDKPVLTSGG SQKVGVKKAL  120
VFYGGKPPKG VKTNWIMHEY RLTDGKSINK PLGCDPTKQK GSLRLDDWVL CRIYKKNNIQ  180
RPVDSDGDHH LHNMNGMLSS IPPSISLGGG HQGTIIKPAS GHMGYNAMLE NHEHNLMFDT  240
RMNSNDADTD TNTNTSNLFP VKRSLPGLFW NEDNTGNSSQ TYTKRFLSES NSSDVSVMAT  300
RTTEENSGSI STLLGQLPQA PQMQQQSMLG SLEDGVFRQP YQLPGMNWYS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15510.1	1e-104	NAC family protein