PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc036945.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family bHLH
Protein Properties Length: 317aa    MW: 35078.5 Da    PI: 7.7388
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc036945.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.81.1e-09179272654
                            HHHHHHHHHHHHHHHHHHHCTSCC.C...............................................TTS-STCHHHHHHHH CS
                    HLH   6 nerErrRRdriNsafeeLrellPk.as............................................kapskKlsKaeiLekAv 48 
                            +++Er RR ri +++ +L++l+P+ +                                             +   +  + a++Le+Av
  Cse_sc036945.1_g020.1 179 SIAERVRRTRISDRIRKLQDLVPNmDKggvfwchgqkwyrgqkvlkwhhpttptvssalgasylegglmrnAVMMQQTNTADMLEEAV 266
                            689*********************888*******************************************8777777*********** PP

                            HHHHHH CS
                    HLH  49 eYIksL 54 
                            eY+k+L
  Cse_sc036945.1_g020.1 267 EYVKNL 272
                            ****98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    
MQPTTGGGGG GIGLSRFRSA PATWLEALLE SEEEDVIIDP PKPPLTPPPH THPFHQQQQH  60
STTGPTSRPP PATYVDPSST MLLPPTSGLS VANRQNSLPA EFFSQINAPG DGSFVSGYSN  120
SGYDDYISPS GLGDQRAKFT TQLSGDQSAL LDAEMDKLLG ESVPCRVRAK RGCATHPRSI  180
AERVRRTRIS DRIRKLQDLV PNMDKGGVFW CHGQKWYRGQ KVLKWHHPTT PTVSSALGAS  240
YLEGGLMRNA VMMQQTNTAD MLEEAVEYVK NLGSIETNAH AWLKFDHRKE VLSSRDRQQI  300
DSLHLVKTSF ELWFFQI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G35460.12e-28bHLH family protein