PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc036892.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family WRKY
Protein Properties Length: 231aa    MW: 26356.9 Da    PI: 9.9559
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc036892.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY71.61.1e-22132192259
                            --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
                   WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                            dDgy+WrKYGqK + ++++ r+YYrCt++   gC+++k+v++++++p   ++tY+g+H ++
  Cse_sc036892.1_g010.1 132 DDGYAWRKYGQKAIIDKKHQRNYYRCTHKfdqGCRATKQVQKTEDEPPKYKVTYSGQHSCK 192
                            8***************************9999**************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    
MESSSWPESL PSKRTKVIQL LREGQQLTNK LRKLLQHPEK ILSNKPSADD MLVQISGMFS  60
NTLSILSSCT FNEIPHILTD DIRSPSNSDG QKTEYTDESP KTVTPVKPKR GCHKRRTDSS  120
WTSTKVTSAL IDDGYAWRKY GQKAIIDKKH QRNYYRCTHK FDQGCRATKQ VQKTEDEPPK  180
YKVTYSGQHS CKNVLSVPQI ILDSSNPKDS SIFLSFETKE VTKSKQLLTF L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.12e-41WRKY family protein