PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc036431.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 462aa MW: 52671.4 Da PI: 7.401

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc036431.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	37.4	8.5e-12	189	264	22	90
FAR1 22 skrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +++g + + +C+keg +++ + + +ek++r+++ + tgC+a+++++++ +gk++++k+ +HnH l Cse_sc036431.1_g010.1 189 LTKSGIVQAKYIMCNKEGAPRHINVDtldpkhSEKQKRNTTLHVTGCQARIRLELDIvSGKYKLIKFIAKHNHMLI 264 4577888888999****9998888899998999999999***********99*************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 462 aa Download sequence
MKPPPDSLKP PPDSLKPPSN RTNQTTIEPP PPPPDSLNQT GIIETTAGFI EAAGIKPPES 60 NLLKPSPSHQ NVRITIEPPP INREIMPPVD ETDLIEVPVD ESRDKDDAVN ETTGKFLDSI 120 LVVKMPNPMG FQDSMRSPRP TLYEHTETPG GSIYWEPHVE GIVVPEEGKY YDTIEEAIDM 180 YSTYAEARLT KSGIVQAKYI MCNKEGAPRH INVDTLDPKH SEKQKRNTTL HVTGCQARIR 240 LELDIVSGKY KLIKFIAKHN HMLIPKEYKH FTKKQRKMTE AEKMFVVKAA TNKIGATRAH 300 NLLTSMKGGY EYVHGTSSDF KNHRRDINIF IGESDAQMLI NKMENRKLYV PNFTFQYKVQ 360 ESELVAMFWA DEVAKCNFKE FGDIVYFDAT FRSNKYNIVF VPFTGVDNHK KCVTLGSGML 420 LKEDTESYTW LLKAFMTAFS KEPTMVKWRP RCQILLQEIQ EM

Sequence ? help Back to Top

Protein Sequence Length: 462 aa Download sequence

MKPPPDSLKP PPDSLKPPSN RTNQTTIEPP PPPPDSLNQT GIIETTAGFI EAAGIKPPES  60
NLLKPSPSHQ NVRITIEPPP INREIMPPVD ETDLIEVPVD ESRDKDDAVN ETTGKFLDSI  120
LVVKMPNPMG FQDSMRSPRP TLYEHTETPG GSIYWEPHVE GIVVPEEGKY YDTIEEAIDM  180
YSTYAEARLT KSGIVQAKYI MCNKEGAPRH INVDTLDPKH SEKQKRNTTL HVTGCQARIR  240
LELDIVSGKY KLIKFIAKHN HMLIPKEYKH FTKKQRKMTE AEKMFVVKAA TNKIGATRAH  300
NLLTSMKGGY EYVHGTSSDF KNHRRDINIF IGESDAQMLI NKMENRKLYV PNFTFQYKVQ  360
ESELVAMFWA DEVAKCNFKE FGDIVYFDAT FRSNKYNIVF VPFTGVDNHK KCVTLGSGML  420
LKEDTESYTW LLKAFMTAFS KEPTMVKWRP RCQILLQEIQ EM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-33	FAR1 family protein