PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc035941.1_g020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | NF-YB | ||||||||
Protein Properties | Length: 157aa MW: 17694.7 Da PI: 4.6543 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 170.4 | 2.1e-53 | 36 | 130 | 3 | 97 |
NF-YB 3 eqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkky 90 +q+r+lPianv+rimk++lP+nakisk+aket+qec+sefisfvt+eas+kc++e+rkt+ngdd++w+++tlGf+dy++plk yl +y Cse_sc035941.1_g020.1 36 QQERLLPIANVGRIMKQILPQNAKISKEAKETMQECASEFISFVTGEASEKCKKERRKTVNGDDVCWSMGTLGFDDYAQPLKRYLDRY 123 799************************************************************************************* PP NF-YB 91 relegek 97 re+eg++ Cse_sc035941.1_g020.1 124 REVEGDR 130 *****97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 157 aa Download sequence |
MPGTEWLTIT STLTPSNLMD DSSNKFTIGE DDTPNQQERL LPIANVGRIM KQILPQNAKI 60 SKEAKETMQE CASEFISFVT GEASEKCKKE RRKTVNGDDV CWSMGTLGFD DYAQPLKRYL 120 DRYREVEGDR SSTSQRNEDE GRPSSSAAEF NPSPKLF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G47810.1 | 6e-56 | NF-YB family protein |