PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc035569.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NAC
Protein Properties Length: 317aa    MW: 36731.9 Da    PI: 6.7877
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc035569.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM162.81.3e-5051321128
                    NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88 
                            lppGfrFhP+deel+ +yL+kkv++  l++  +i+e+++yk++Pw+Lp+k+  +e+ewyfF++rd+ky++g r+nr++ sgyWkatg+
  Cse_sc035569.1_g030.1   5 LPPGFRFHPSDEELIIHYLHKKVTSMVLPA-LIIAEIELYKYNPWELPSKALFGEDEWYFFTPRDRKYPNGMRPNRMAGSGYWKATGT 91 
                            79*************************999.67***************87778999******************************** PP

                    NAM  89 dkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                            d++++ + +++ vg+kk Lvfykgr p+g+ktdW+mheyr+
  Cse_sc035569.1_g030.1  92 DRPIMGSrGDKIVGVKKALVFYKGRPPRGHKTDWIMHEYRI 132
                            *****9857778***************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    
METQLPPGFR FHPSDEELII HYLHKKVTSM VLPALIIAEI ELYKYNPWEL PSKALFGEDE  60
WYFFTPRDRK YPNGMRPNRM AGSGYWKATG TDRPIMGSRG DKIVGVKKAL VFYKGRPPRG  120
HKTDWIMHEY RILDSVVCSS SKPKESMRLD DWVLCRVRQK TCTQRNLCED RYAQSVPEPE  180
NSIGTNTKLE ILKETLFKDC PMLPFIFDSH LDLFSMDTMS STVSFEESKN SFDSSNNKEN  240
FQKPFDGPIS HDKKRKELNQ ELPFIDSNKK LRLVETQHEN TGSLVVDSNA MSSYGGDLSD  300
MCTYMMAYED LNHLTFM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61110.15e-81NAC family protein