PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc035248.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

CPP

Protein Properties

Length: 491aa MW: 53325.8 Da PI: 8.3469

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc035248.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	50.6	3.8e-16	121	160	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 k++kgC+Ckks Clk+YCeCf+a+ Cse+CkC dCkN e Cse_sc035248.1_g020.1 121 KHNKGCHCKKSGCLKRYCECFQAQILCSENCKCMDCKNFE 160 589***********************************65 PP

Sequence ? help Back to Top
Protein Sequence Length: 491 aa Download sequence
MDFPAGKNLV RQLDFNNAAA PAVAPAPTPV AVLPPPPPQQ QHVLGHMQPE SPKAPPRPNV 60 EGKEGTPKKQ KQCNCKHSRC LKLGAIESTL ERNPQAFRPK IAQSPHGKRD NKEETGEVVA 120 KHNKGCHCKK SGCLKRYCEC FQAQILCSEN CKCMDCKNFE GSQERQAIFR DPIQDVAYYQ 180 QAVNAARTNA AITGAVGASG YGAPLVGRKR KPQDLFLVGS PASRDSSFHS AAQFQQMNHV 240 RGSAPLSTWP SVPGARIANN APVGSPIYRS LLADLVRSQD TNELCSVLVV YAHEAARLLS 300 DEKNAKDKME TNNNGESSHS SSLSGARVDK PGPEESGSDG QTDGTKARPL SPGTLALMCD 360 EGDTMFVDST NINGLRDHGT DHLPNGQVIS ETYAEQEKVV LTTFRDCLNK LITFGELKET 420 QCSSLARSDF RSQSQSQIKP VESPTTNTLQ VPFVNGFPKA ATSQNNQNHT NLKTPFHAEN 480 SELRPRPEKG L

Sequence ? help Back to Top

Protein Sequence Length: 491 aa Download sequence

MDFPAGKNLV RQLDFNNAAA PAVAPAPTPV AVLPPPPPQQ QHVLGHMQPE SPKAPPRPNV  60
EGKEGTPKKQ KQCNCKHSRC LKLGAIESTL ERNPQAFRPK IAQSPHGKRD NKEETGEVVA  120
KHNKGCHCKK SGCLKRYCEC FQAQILCSEN CKCMDCKNFE GSQERQAIFR DPIQDVAYYQ  180
QAVNAARTNA AITGAVGASG YGAPLVGRKR KPQDLFLVGS PASRDSSFHS AAQFQQMNHV  240
RGSAPLSTWP SVPGARIANN APVGSPIYRS LLADLVRSQD TNELCSVLVV YAHEAARLLS  300
DEKNAKDKME TNNNGESSHS SSLSGARVDK PGPEESGSDG QTDGTKARPL SPGTLALMCD  360
EGDTMFVDST NINGLRDHGT DHLPNGQVIS ETYAEQEKVV LTTFRDCLNK LITFGELKET  420
QCSSLARSDF RSQSQSQIKP VESPTTNTLQ VPFVNGFPKA ATSQNNQNHT NLKTPFHAEN  480
SELRPRPEKG L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29000.1	1e-127	CPP family protein