PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc035023.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB
Protein Properties Length: 328aa    MW: 37673.4 Da    PI: 5.362
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc035023.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding57.72.6e-183077148
                           TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                           rg+WT eEd  l+++++ +G g+W++ ar+ g++Rt+k+c++rw++yl
  Cse_sc035023.1_g010.1 30 RGPWTVEEDFTLINYIAHHGEGRWNSLARCAGLKRTGKSCRLRWLNYL 77
                           89********************************************97 PP
2Myb_DNA-binding51.22.8e-1683126146
                            TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
        Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                            rg+ T eE++l+++++ ++G++ W++Ia++++ gRt++++k++w++
  Cse_sc035023.1_g010.1  83 RGNITLEEQLLILELHSRWGNR-WSKIAQHLP-GRTDNEIKNYWRT 126
                            7999******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    
MNSNNNNNNC MEIGGSEDDE QMNMMEDLRR GPWTVEEDFT LINYIAHHGE GRWNSLARCA  60
GLKRTGKSCR LRWLNYLRPD VRRGNITLEE QLLILELHSR WGNRWSKIAQ HLPGRTDNEI  120
KNYWRTRVQK HAKQLKCDVN SKQFKDTMRY LWMPRLVERI QAAATTTTIT EGSSSSTTTT  180
STATTTNFYN PLNQTNNMDN IVTSQFITPQ QSHNMSSNYG NTHVNPSYTT DNSSNTAVSP  240
VSDMTDCYYP TNQNPSQDLY QSSNPIATGF SDTMISPTGY FNQGMDFQTM VDHQNSQWSE  300
GENGGGDDFS DNLWNVEDIW FLKQQFDM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49620.13e-94MYB family protein