PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc035017.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 325aa MW: 35701.2 Da PI: 8.606 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 48.7 | 1.3e-15 | 143 | 202 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--.....HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknryps.....aeereeLAkklgLterqVkvWFqNrRakek 56 rk+ +++k+q +Lee F+++++++ a+++ LAk+l+L rqV vWFqNrRa+ k Cse_sc035017.1_g010.1 143 RKKLRLSKDQAAVLEETFKEHNTLNpvsgiAKQKLALAKQLDLRPRQVEVWFQNRRARTK 202 788899**************9999855555689999**********************98 PP | |||||||
2 | HD-ZIP_I/II | 119.7 | 1.6e-38 | 143 | 237 | 1 | 91 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLep.....erKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLeke 83 +kk+rlsk+q+++LEe+F+e+++L+p ++K +la++L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++d+l+een+rL+ke Cse_sc035017.1_g010.1 143 RKKLRLSKDQAAVLEETFKEHNTLNPvsgiaKQKLALAKQLDLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCDTLTEENRRLQKE 230 69***********************87777689******************************************************* PP HD-ZIP_I/II 84 veeLreel 91 v+eLr +l Cse_sc035017.1_g010.1 231 VNELR-AL 237 ****9.55 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 325 aa Download sequence |
MSKDDELGLG LTLSLSCPKG YQQHPPPPPP PQPSQTPSQP PVARFPLNLM PRHHKLSFVI 60 NHHATDLNMA RGIDVNRAPS VSAVMALTAE REDDALVSSP NSTVSSVSGK RIEREENEAE 120 RESSSHGDGG DDDDDGGDAA AARKKLRLSK DQAAVLEETF KEHNTLNPVS GIAKQKLALA 180 KQLDLRPRQV EVWFQNRRAR TKLKQTEVDC EYLKRCCDTL TEENRRLQKE VNELRALKLS 240 PQFYMNMNPP TTLTMCPQCE RVAVSSSSSS SAAAATSSVV GSSGLPKGLQ GSMTANAQKQ 300 TRPFLPRASI IPHRPIDGHQ VHPRW |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 197 | 205 | RRARTKLKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G44910.1 | 6e-59 | HD-ZIP family protein |