PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc034664.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

WRKY

Protein Properties

Length: 417aa MW: 46435.7 Da PI: 9.1623

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc034664.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	99	3.1e-31	161	217	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +DgynWrKYGqK+vkgse++rsYY+Ct+++Cpvkkkver d+ v+ei+Y+g+Hnh+ Cse_sc034664.1_g010.1 161 EDGYNWRKYGQKQVKGSEYARSYYKCTHQNCPVKKKVERGV-DGLVTEIIYKGKHNHQ 217 8**************************************.*************8 PP
2	WRKY	47.6	3.4e-15	343	383	19	59
SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 19 efprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 + +sYY+Ct +gC+v+k+ver ++dpk v++tYeg+Hnh+ Cse_sc034664.1_g010.1 343 KWRKSYYKCTIKGCNVRKHVERPSSDPKSVITTYEGKHNHQ 383 5568************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 417 aa Download sequence
MDNNKKSLPL STPYLRPTIS IPTSSSVDNL FTAPGETPGP MTLISNLFSE NDVGPDTRTF 60 SQLLAGLSPA TLLESPAQGS LGMSHRQALA HVTAQAAQLQ PIPTTHHHVP PPMPDHNVTM 120 MAPEVSKSSS HSHPHLAVAD KPAEDGSHSH PHLAVADKPA EDGYNWRKYG QKQVKGSEYA 180 RSYYKCTHQN CPVKKKVERG VDGLVTEIIY KGKHNHQPPR TVGNFNDTEP FNDQTSYFNY 240 LRESSSIKKD QQSSHDMSGS WHNDDVTKHQ AKKRESSSIK KDQQSSHDMS GSWDNDDVTK 300 HQAKKRNIEV KGCDPVSSHR TLPDSRIIVQ ATSKIDLLND GYKWRKSYYK CTIKGCNVRK 360 HVERPSSDPK SVITTYEGKH NHQALVSKNS IHEATNDNTS QLKPNNPVGL LRLKEEQ

Sequence ? help Back to Top

Protein Sequence Length: 417 aa Download sequence

MDNNKKSLPL STPYLRPTIS IPTSSSVDNL FTAPGETPGP MTLISNLFSE NDVGPDTRTF  60
SQLLAGLSPA TLLESPAQGS LGMSHRQALA HVTAQAAQLQ PIPTTHHHVP PPMPDHNVTM  120
MAPEVSKSSS HSHPHLAVAD KPAEDGSHSH PHLAVADKPA EDGYNWRKYG QKQVKGSEYA  180
RSYYKCTHQN CPVKKKVERG VDGLVTEIIY KGKHNHQPPR TVGNFNDTEP FNDQTSYFNY  240
LRESSSIKKD QQSSHDMSGS WHNDDVTKHQ AKKRESSSIK KDQQSSHDMS GSWDNDDVTK  300
HQAKKRNIEV KGCDPVSSHR TLPDSRIIVQ ATSKIDLLND GYKWRKSYYK CTIKGCNVRK  360
HVERPSSDPK SVITTYEGKH NHQALVSKNS IHEATNDNTS QLKPNNPVGL LRLKEEQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03340.1	2e-86	WRKY family protein