PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc034317.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | SBP | ||||||||
Protein Properties | Length: 217aa MW: 24837.7 Da PI: 7.0048 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 117.6 | 6.2e-37 | 19 | 94 | 2 | 77 |
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 C v+gC dl +++ yhrrhkvCe+hsk+p vl+sg+ rfCqqCsrf +l+efDeekrsCr+rL++hn+rrrk+q Cse_sc034317.1_g010.1 19 CLVDGCMDDLRNCRMYHRRHKVCEAHSKSPYVLISGQALRFCQQCSRFQSLEEFDEEKRSCRKRLDGHNRRRRKTQ 94 **************************************************************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 217 aa Download sequence |
MASSKRACTN TDAIQVVNCL VDGCMDDLRN CRMYHRRHKV CEAHSKSPYV LISGQALRFC 60 QQCSRFQSLE EFDEEKRSCR KRLDGHNRRR RKTQACLFSP HSGTNMLQSD CQPVHPAMAF 120 MNPHFNHPVD YTDYVYSVVC TVIVFRVIRY SLSDVEHPLS GTFSTTSNYS DPGLCYASLE 180 NDFDAGWDGV TDMGPYDFDA GWDVQSSNVN HQGYFRN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G50670.1 | 1e-39 | SBP family protein |