PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc034293.1_g020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | GRF | ||||||||
Protein Properties | Length: 146aa MW: 16370.7 Da PI: 8.3226 | ||||||||
Description | GRF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRC | 73.3 | 2.8e-23 | 101 | 140 | 1 | 40 |
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsr 40 +aepgrC+RtDGKkWRCs++v++g+k+CErHlhrgrsr+ Cse_sc034293.1_g020.1 101 EAEPGRCKRTDGKKWRCSKEVVSGHKYCERHLHRGRSRKD 140 58*********************************99874 PP | |||||||
2 | QLQ | 50.9 | 4.8e-18 | 43 | 77 | 3 | 37 |
QLQ 3 FTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 FT +Ql++Lk Q+l+y y+ a++PvP++L+++i++ Cse_sc034293.1_g020.1 43 FTFMQLEELKLQALIYNYIEAGLPVPSHLILPIWN 77 9*********************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 146 aa Download sequence |
MKLVAALTMN GVEGSFSLAD SSSIFDQNAN YMNIMSMNGG TGFTFMQLEE LKLQALIYNY 60 IEAGLPVPSH LILPIWNSVL ASFTGSGCDH SLYDNYKNTM EAEPGRCKRT DGKKWRCSKE 120 VVSGHKYCER HLHRGRSRKD VEAKIN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G52910.1 | 1e-33 | GRF family protein |