PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc034208.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | MYB | ||||||||
Protein Properties | Length: 274aa MW: 29522.5 Da PI: 6.7014 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 56.4 | 6.7e-18 | 31 | 76 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+W++eEd +l d+v+++G+++W +Iar ++ gR++k+c++rw + Cse_sc034208.1_g010.1 31 RGPWSQEEDVILGDLVTKFGPRNWGLIARGIP-GRSGKSCRLRWCNQ 76 89******************************.***********985 PP | |||||||
2 | Myb_DNA-binding | 26.2 | 1.9e-08 | 83 | 113 | 1 | 32 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg 32 r+++T Ed ++v+a++++G++ W+ Ia+ + Cse_sc034208.1_g010.1 83 RKPFTDAEDRIIVEAHAKYGNK-WAIIAKLLR 113 789*******************.******986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 274 aa Download sequence |
MVEEMNTNTI PVPDSSPESD VAAGEKKSKV RGPWSQEEDV ILGDLVTKFG PRNWGLIARG 60 IPGRSGKSCR LRWCNQLDPA LERKPFTDAE DRIIVEAHAK YGNKWAIIAK LLRELQDVTG 120 MEVSNYHISV DPSLTHQTLF RPTPHVGAFS VCAPPNGIQI GESRAVHSTP GPLIKACKPE 180 SIGCKFLKGF SAECVIPSRC GHGCCSGSGH GSKSQTSLLG PDFVDYEELA PFSNQELATI 240 AADLNSIAWI KSGLEKPGAT QPQSHISLPV EGLS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G55730.1 | 1e-44 | MYB family protein |