PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc034069.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | bHLH | ||||||||
Protein Properties | Length: 239aa MW: 26889.6 Da PI: 8.9687 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 32.2 | 1.9e-10 | 187 | 223 | 4 | 45 |
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLe 45 +h ++Er+RR+++N++f Lr ++P+ + K++Ka+iLe Cse_sc034069.1_g010.1 187 NHVAVERQRRENLNQRFYALRAVVPNiS------KMDKASILE 223 799***********************66......********8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 239 aa Download sequence |
MVENTLTYSL QWILWVIHKD TLSELSRFRR SDCGGVLEIN SRPKPAFDAK SCEEHYHSRS 60 YLAKLAWVQT FVLVPVKGGV LEIGSSSSIH DPTILFQGPN LYIFGYHPPK VLPNIFGQEL 120 SLGAKSTPKS GPVSIGFSPK VEDDMEFGSE SYEVQPSFGR NYSNGYQSME PRKRGRKPAN 180 GREEPLNHVA VERQRRENLN QRFYALRAVV PNISKMDKAS ILEVTGAPVV DFMARKDDA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G16430.1 | 2e-52 | bHLH family protein |