PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc033785.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

bHLH

Protein Properties

Length: 377aa MW: 42670 Da PI: 6.7606

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc033785.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	44.7	2.4e-14	193	239	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h+e+ErrRR+riN+ +++Lr+llP+ +K +Ka+ L ++++++k+L Cse_sc033785.1_g010.1 193 KSHSEAERRRRERINNHLAKLRSLLPST-----TKTDKASLLAEVIQHVKEL 239 79***********************9.....8**************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 377 aa Download sequence
MCAKREEEVV IEEGDHHHQQ QQQNIQRFQE QQQLVLQEIH QQQQQNMGSI NDYSYSNTRL 60 MFPSSSSSEN INPIMHQHQQ QASSWSTLPQ VFHQNNLNPL LNYPTRDNDQ FLIPQPPPPP 120 PLSCYGGLFN RRVPSGLQFA YEGNPASDHH LRLLSETLGH VVQPGSGPFG LHAEMNKMTA 180 QEIMDAKALA ASKSHSEAER RRRERINNHL AKLRSLLPST TKTDKASLLA EVIQHVKELK 240 RQTSIIAEQC PVPTEIDELT VDNASDKDGK LLIKASLCCE DRSDLLPDLI KTLKALRLRT 300 LKAEITTLGG RVKNVLFITA DEDHLNGNDD QQMVSYSINT IQEALKQVME KTNGDDSGSV 360 KRQRTNNINI LEHHRSL

Sequence ? help Back to Top

Protein Sequence Length: 377 aa Download sequence

MCAKREEEVV IEEGDHHHQQ QQQNIQRFQE QQQLVLQEIH QQQQQNMGSI NDYSYSNTRL  60
MFPSSSSSEN INPIMHQHQQ QASSWSTLPQ VFHQNNLNPL LNYPTRDNDQ FLIPQPPPPP  120
PLSCYGGLFN RRVPSGLQFA YEGNPASDHH LRLLSETLGH VVQPGSGPFG LHAEMNKMTA  180
QEIMDAKALA ASKSHSEAER RRRERINNHL AKLRSLLPST TKTDKASLLA EVIQHVKELK  240
RQTSIIAEQC PVPTEIDELT VDNASDKDGK LLIKASLCCE DRSDLLPDLI KTLKALRLRT  300
LKAEITTLGG RVKNVLFITA DEDHLNGNDD QQMVSYSINT IQEALKQVME KTNGDDSGSV  360
KRQRTNNINI LEHHRSL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	199	204	ERRRRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68810.1	9e-87	bHLH family protein