PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc032831.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

GRF

Protein Properties

Length: 501aa MW: 54977.8 Da PI: 8.4381

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc032831.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	76.3	3.2e-24	208	252	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCsr++++++k+CErH++rgr+rsrk++e+ Cse_sc032831.1_g010.1 208 DPEPGRCRRTDGKKWRCSRDAVSDQKYCERHINRGRHRSRKPVES 252 79****************************************986 PP
2	QLQ	55.9	1.3e-19	136	172	1	37
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 ++FT++Q+++L++Q+l+yK+++an+ vP++Ll ++++ Cse_sc032831.1_g010.1 136 GPFTPSQWMELEHQALIYKHFVANVTVPAHLLNPLRN 172 59******************************99986 PP

Sequence ? help Back to Top
Protein Sequence Length: 501 aa Download sequence
MDFLMTTFGN NTLLRKHDDD EKNNNNNGSN MFIKQHRSDD QQQQQHFVLP SSKSSRTDYF 60 DQPNKTMSMR SDPMLSLSAP DTKNMLSFSS NDTTKDANHT SLFSFYQPSN AYIRNTGYGS 120 GGIQTGMNIP ISRYKGPFTP SQWMELEHQA LIYKHFVANV TVPAHLLNPL RNSLNTFLFP 180 GSSSSASYTP NSYGWGAFQL GFSGGNTDPE PGRCRRTDGK KWRCSRDAVS DQKYCERHIN 240 RGRHRSRKPV ESQNGHAVSG PTALKVGPLI SSSTIPVSNT RASTTVIANA TVHNQFKTID 300 IPINRTQELQ AFAINSSSDS LMYPANYNSL INHGAPNSNP IPHFVEEWSK DQSLKPDWTQ 360 LSMSIPMAAS DFSSSSNSPA QEKLAVPPLS LTTEFELELA HKQASNWIPI SWGNTMGGGG 420 PLGEVLNRTS SSSGVKSKDT SSGSEMWDAV NYHMGSSPTG VLQKTTFVSL SNSSSGSSPK 480 GNKTDEHGGF YDELLLSTLA S

Sequence ? help Back to Top

Protein Sequence Length: 501 aa Download sequence

MDFLMTTFGN NTLLRKHDDD EKNNNNNGSN MFIKQHRSDD QQQQQHFVLP SSKSSRTDYF  60
DQPNKTMSMR SDPMLSLSAP DTKNMLSFSS NDTTKDANHT SLFSFYQPSN AYIRNTGYGS  120
GGIQTGMNIP ISRYKGPFTP SQWMELEHQA LIYKHFVANV TVPAHLLNPL RNSLNTFLFP  180
GSSSSASYTP NSYGWGAFQL GFSGGNTDPE PGRCRRTDGK KWRCSRDAVS DQKYCERHIN  240
RGRHRSRKPV ESQNGHAVSG PTALKVGPLI SSSTIPVSNT RASTTVIANA TVHNQFKTID  300
IPINRTQELQ AFAINSSSDS LMYPANYNSL INHGAPNSNP IPHFVEEWSK DQSLKPDWTQ  360
LSMSIPMAAS DFSSSSNSPA QEKLAVPPLS LTTEFELELA HKQASNWIPI SWGNTMGGGG  420
PLGEVLNRTS SSSGVKSKDT SSGSEMWDAV NYHMGSSPTG VLQKTTFVSL SNSSSGSSPK  480
GNKTDEHGGF YDELLLSTLA S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22840.1	6e-74	GRF family protein