PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc031592.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB_related
Protein Properties Length: 263aa    MW: 29137.6 Da    PI: 9.4541
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc031592.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding43.48.1e-1479123347
                            SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
        Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                            +WT++E++l++ + ++ G+g+W+ I+r + k+Rt+ q+ s+ qky
  Cse_sc031592.1_g010.1  79 PWTEDEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKY 123
                            8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
MSCDGGSNEI MLFGVRVKID PMRKSVSMNN LSQYEQPPLL ANDGNKADVV VSADNGYASA  60
DDVVRHQANG GRERKRGVPW TEDEHKLFLL GLQKVGKGDW RGISRNFVKT RTPTQVASHA  120
QKYFLRRSNL NRRRRRSSLF DITTDSVAPM PIDEQQSNED NKGQTVQQPS MPSSGFPTST  180
FPVNVVSVLP QVQSETPMQT ISFSNGDQVN SGSTLLVHPV PVFSTPNPST RVDLNLNQKY  240
ETNPSQVSLN LSLSFDQNMI SVN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74840.17e-58MYB_related family protein