PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc031470.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 259aa MW: 30338.5 Da PI: 8.2337 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 85.6 | 2.8e-27 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien++ rqvtfskRr+g+lKK +ELSvLCda++ +i+fss+gkl+ey + Cse_sc031470.1_g010.1 9 KRIENNTSRQVTFSKRRTGLLKKTHELSVLCDAQIGLIVFSSKGKLFEYTT 59 79***********************************************75 PP | |||||||
2 | K-box | 68.1 | 3e-23 | 75 | 166 | 5 | 95 |
K-box 5 sgks.leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeen 91 +g++ e+++ e+++ el+++kke+ nLq ++ +++G+dL+s +l+eL++LeqqLe s++k+R++K +ll +q+++lq+ ek l++en Cse_sc031470.1_g010.1 75 TGSRiPENTNREQMHSELSRMKKETLNLQLSLQRYKGDDLSSAQLEELNHLEQQLEFSVQKVRARKFQLLQQQVDNLQRTEKVLEKEN 162 55555788999***************************************************************************** PP K-box 92 kaLr 95 +++ Cse_sc031470.1_g010.1 163 EEMY 166 9875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 259 aa Download sequence |
MGRGKIEVKR IENNTSRQVT FSKRRTGLLK KTHELSVLCD AQIGLIVFSS KGKLFEYTTH 60 PLSMPQIIDR YLKATGSRIP ENTNREQMHS ELSRMKKETL NLQLSLQRYK GDDLSSAQLE 120 ELNHLEQQLE FSVQKVRARK FQLLQQQVDN LQRTEKVLEK ENEEMYHWLM GKQQEEINQQ 180 QAMAMTELKL VGQEHQLFEQ FPFYGSEQPN SVLQLAADLP DLQLHSYPYR LQSTQANLQE 240 STSAPHNIFE FIIRWTCNK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G23260.2 | 3e-60 | MIKC_MADS family protein |