PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc030434.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

WRKY

Protein Properties

Length: 388aa MW: 43575.1 Da PI: 8.0663

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc030434.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	91.3	7.6e-29	188	244	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK+vk s+ prsYY+Ct+ +Cpv+kkv + d+++ ei+Y+g+Hnh+ Cse_sc030434.1_g010.1 188 SDGYSWRKYGQKQVKASQIPRSYYKCTQVNCPVTKKVGHFL-DGNISEIIYKGQHNHD 244 7*************************************9.*************7 PP
2	WRKY	99.9	1.6e-31	298	356	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDg++WrKYGqK+vkg+++prsYYrCt+agC+v+k+ver+ +dpk v++tYeg+H+h+ Cse_sc030434.1_g010.1 298 LDDGFKWRKYGQKVVKGNTYPRSYYRCTYAGCKVRKQVERAYSDPKSVVTTYEGKHKHD 356 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 388 aa Download sequence
MAESGSGRGS TSPPPPQRRV PSMITLPPRS SLDTFLKGLS PGPMTFVSNF FADHYPDTDV 60 QSFSQLLAEI LPSPRTHNQP TPLLNHDSAS NYQETVEGYK QIRPVELAST LQSPLEMMLH 120 PQALSHLPED IINPENGRSL SATFDEESRT TQTSDHDDSQ IESVDKFSVF QSGHLKSEPV 180 GCVPMPASDG YSWRKYGQKQ VKASQIPRSY YKCTQVNCPV TKKVGHFLDG NISEIIYKGQ 240 HNHDPTTLCN QAKDSAANLK KRKIGKLEVG YVDQTSMPQV MITEPKVVVQ MRSEVDVLDD 300 GFKWRKYGQK VVKGNTYPRS YYRCTYAGCK VRKQVERAYS DPKSVVTTYE GKHKHDIPIF 360 AKPSSCNQTN YEKELPILLE LKEEQLTS

Sequence ? help Back to Top

Protein Sequence Length: 388 aa Download sequence

MAESGSGRGS TSPPPPQRRV PSMITLPPRS SLDTFLKGLS PGPMTFVSNF FADHYPDTDV  60
QSFSQLLAEI LPSPRTHNQP TPLLNHDSAS NYQETVEGYK QIRPVELAST LQSPLEMMLH  120
PQALSHLPED IINPENGRSL SATFDEESRT TQTSDHDDSQ IESVDKFSVF QSGHLKSEPV  180
GCVPMPASDG YSWRKYGQKQ VKASQIPRSY YKCTQVNCPV TKKVGHFLDG NISEIIYKGQ  240
HNHDPTTLCN QAKDSAANLK KRKIGKLEVG YVDQTSMPQV MITEPKVVVQ MRSEVDVLDD  300
GFKWRKYGQK VVKGNTYPRS YYRCTYAGCK VRKQVERAYS DPKSVVTTYE GKHKHDIPIF  360
AKPSSCNQTN YEKELPILLE LKEEQLTS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03340.1	4e-64	WRKY family protein