PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc030388.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

WRKY

Protein Properties

Length: 503aa MW: 54988.3 Da PI: 8.6526

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc030388.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	94.4	8.1e-30	239	298	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt + +Cpv+k+v+r+aed +v+++tYeg+Hnh+ Cse_sc030388.1_g020.1 239 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVSsSCPVRKHVQRCAEDRSVLITTYEGTHNHP 298 58************************999**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 503 aa Download sequence
MEASLNMGKP MFSFFDVKEE ETKNKNTVHL NDDQVLVLKT SSQAMTSDKN DVSTSLFKGE 60 DPADHYKQDD LVSSAKAEMG QVRQENRTLK QKLSRVLKEY KSLQMHFNDF FQQEVPKSSE 120 SLAPDQETNG AEFISLSLGT LSNCKPKSDD VPKKVNCFSK SKDDSGGDQE LKLGLGCKFD 180 LTPKKVVIND VKKDEIAQSL EPLVHNPKTE RSEDNDLLDQ IPLKKARVSV KVICDTQTMN 240 DGCQWRKYGQ KIAKGNPCPR AYYRCTVSSS CPVRKHVQRC AEDRSVLITT YEGTHNHPLS 300 ASATAMASTT SAAASMLKST SSTSQPGLTT TAPSSTTTAS ATTFSSHHGI TNYSPRAPQY 360 PFYLPNTTIS TYQSHPTITL DLTSSPHFNR SNSSNFSMTA PRYSSSTCLN FSSPSSSSSS 420 SIESNFKNPN PFSYLGRQML NEPFHPTPSL DSFKKNSTSA SQQHSPDTVA AATKALTSNP 480 SFRSALAVQI TPLVRNAGGG ASI

Sequence ? help Back to Top

Protein Sequence Length: 503 aa Download sequence

MEASLNMGKP MFSFFDVKEE ETKNKNTVHL NDDQVLVLKT SSQAMTSDKN DVSTSLFKGE  60
DPADHYKQDD LVSSAKAEMG QVRQENRTLK QKLSRVLKEY KSLQMHFNDF FQQEVPKSSE  120
SLAPDQETNG AEFISLSLGT LSNCKPKSDD VPKKVNCFSK SKDDSGGDQE LKLGLGCKFD  180
LTPKKVVIND VKKDEIAQSL EPLVHNPKTE RSEDNDLLDQ IPLKKARVSV KVICDTQTMN  240
DGCQWRKYGQ KIAKGNPCPR AYYRCTVSSS CPVRKHVQRC AEDRSVLITT YEGTHNHPLS  300
ASATAMASTT SAAASMLKST SSTSQPGLTT TAPSSTTTAS ATTFSSHHGI TNYSPRAPQY  360
PFYLPNTTIS TYQSHPTITL DLTSSPHFNR SNSSNFSMTA PRYSSSTCLN FSSPSSSSSS  420
SIESNFKNPN PFSYLGRQML NEPFHPTPSL DSFKKNSTSA SQQHSPDTVA AATKALTSNP  480
SFRSALAVQI TPLVRNAGGG ASI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15130.1	4e-49	WRKY family protein