PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc030288.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family LBD
Protein Properties Length: 207aa    MW: 22948.5 Da    PI: 6.6479
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc030288.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260132.12.3e-41521511100
                 DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqle 88 
                            +CaaCk+lrr+C ++C+lapyfp ++p+kf ++h++FGasn++kll+++pe  r da+ss+vyeA+ar+rdPvyG++g+i +lq+q++
  Cse_sc030288.1_g010.1  52 PCAACKILRRRCIEKCMLAPYFPPTDPHKFTIAHRVFGASNIIKLLQEIPEYCRADAVSSMVYEANARLRDPVYGCAGTICHLQKQVS 139
                            7*************************************************************************************** PP

                 DUF260  89 qlkaelallkee 100
                            +l+aela++++e
  Cse_sc030288.1_g010.1 140 ELQAELAKAQAE 151
                            ********9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    
METGQKLLVV TASPMTISTP TEETSYSPPS SQLSPTSVLA APLPPHPVVL SPCAACKILR  60
RRCIEKCMLA PYFPPTDPHK FTIAHRVFGA SNIIKLLQEI PEYCRADAVS SMVYEANARL  120
RDPVYGCAGT ICHLQKQVSE LQAELAKAQA EMVNLQCRQS NILTLIRMQM EQQPPPISHP  180
PQQQNVYESL SFFDDNANLS SLEPLWT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07900.11e-59LBD family protein