PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc029759.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

CPP

Protein Properties

Length: 568aa MW: 64138.7 Da PI: 9.3809

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc029759.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	42.8	1.1e-13	89	125	1	37
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCk 37 k++kgC+Ckks Clk+YCeCf+a+ Cse+ kC dCk Cse_sc029759.1_g020.1 89 KHNKGCHCKKSGCLKRYCECFQAQILCSENFKCMDCK 125 589*********************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 568 aa Download sequence
TFATFITLTT ILIHHRNHYR FHRSPPIIGV YCDGCNCVNC QNNVDNEPAR RGAIKSTLER 60 NPQAFRPKIA QSPLGKRDNK EETGEVVAKH NKGCHCKKSG CLKRYCECFQ AQILCSENFK 120 CMDCKKFEGS QERQAIFRDP ILDVAYYQQA ANAARTNAAI TGVVGASGYG APLMNHVRGS 180 APLSTWPSVP GARIANNASV VGGSKRQDNQ SYSQVIRVIR GTGKVNLEVI KQGIKIVQGQ 240 EQGRTMVVQL PGEARWMVVM NTNGYNLAVD IWSLGSTILE MATSKPPWGQ YKGVAAIFKI 300 GNCKDMPEIP EHLSNDAKSF IKLCLQRDPR LRPQPQSCCI THFYKIKLHQ EEPMSSSVPI 360 FRGKGDYHID FEPAPRITEA DKTNDKRSLK RALDRRLYLL IYGDAYGTPK GQPVWHLPEK 420 MYNSEETLRK VILPYLWSLN RALDRRLYLL IYGDAYGTPK GQPVWHLPEK MYNSEETLRK 480 CAESALQSVI GDLSNTYFVG SAPMGHITTK PAEKNEDISS LTRFFFKSQV IATNKVNIKC 540 KDFVWVTKDE LLEYFPEHSN YLMKMIIS

Sequence ? help Back to Top

Protein Sequence Length: 568 aa Download sequence

TFATFITLTT ILIHHRNHYR FHRSPPIIGV YCDGCNCVNC QNNVDNEPAR RGAIKSTLER  60
NPQAFRPKIA QSPLGKRDNK EETGEVVAKH NKGCHCKKSG CLKRYCECFQ AQILCSENFK  120
CMDCKKFEGS QERQAIFRDP ILDVAYYQQA ANAARTNAAI TGVVGASGYG APLMNHVRGS  180
APLSTWPSVP GARIANNASV VGGSKRQDNQ SYSQVIRVIR GTGKVNLEVI KQGIKIVQGQ  240
EQGRTMVVQL PGEARWMVVM NTNGYNLAVD IWSLGSTILE MATSKPPWGQ YKGVAAIFKI  300
GNCKDMPEIP EHLSNDAKSF IKLCLQRDPR LRPQPQSCCI THFYKIKLHQ EEPMSSSVPI  360
FRGKGDYHID FEPAPRITEA DKTNDKRSLK RALDRRLYLL IYGDAYGTPK GQPVWHLPEK  420
MYNSEETLRK VILPYLWSLN RALDRRLYLL IYGDAYGTPK GQPVWHLPEK MYNSEETLRK  480
CAESALQSVI GDLSNTYFVG SAPMGHITTK PAEKNEDISS LTRFFFKSQV IATNKVNIKC  540
KDFVWVTKDE LLEYFPEHSN YLMKMIIS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G20110.1	2e-44	CPP family protein