PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc029518.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 332aa    MW: 38071.2 Da    PI: 6.4562
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc029518.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR122.63.4e-0792189181
                   FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..................tekerrtraetrtgCkaklkvkk 70 
                            ++Y++YA+  GF+++k+ ++ + ++g + ++  +C+keg +++ + +                   ++++r  +    + +a++ ++k
  Cse_sc029518.1_g010.1  92 DMYSTYAEAGGFQIKKAGQRLT-KSGIVQHKYIMCNKEGAPRHINVEtldpkhsgyeyvhgtsndFKNHQRDINMFIGESDAQMLINK 178
                            58***************98888.7888999999*******999877778888888888888775422333333333346678888888 PP

                   FAR1  71 ekdgkwevtkl 81 
                            +++ k +v ++
  Cse_sc029518.1_g010.1 179 MENRKMYVPNF 189
                            88777777665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    
MKPPPESHET TGITMKPPSD SSTLHQTLGI TMKPPSDASP SHQAADSMRS PRPTLYEHTE  60
TPAGSIYWEP HVEGIHVPED GRYYDTIEEA IDMYSTYAEA GGFQIKKAGQ RLTKSGIVQH  120
KYIMCNKEGA PRHINVETLD PKHSGYEYVH GTSNDFKNHQ RDINMFIGES DAQMLINKME  180
NRKMYVPNFT FQYKVEDNEL VAMFWADEVA KCNYKEFGDI ISFDATFRSN KYNIVFVPFS  240
GVDNHRKCVT LGSGMILKED TESYTWLLKA FMTAFSKEPT MVVTDQDGAM KRAIEAVFTK  300
SKHRLCMWHI HQKIPAKIVW NMFMEPLEFE EK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.17e-32FAR1 family protein