PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc028931.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

TALE

Protein Properties

Length: 683aa MW: 74891.5 Da PI: 8.2492

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc028931.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	27.1	7e-09	423	454	23	54
SS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 23 rypsaeereeLAkklgLterqVkvWFqNrRak 54 ryp+ +++ LAk++gLt +qV++WF N R + Cse_sc028931.1_g010.1 423 RYPKDSDKHMLAKQTGLTRSQVSNWFINARVR 454 8*****************************88 PP
2	BELL	120.8	5.8e-39	254	325	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 erqe+q+kkakL+++l+eV++rY+qy++q+q+vis Fe++ag+gsak Yt+lAl++iS++FrcLkdai++qi Cse_sc028931.1_g010.1 254 ERQEIQMKKAKLINMLDEVEQRYRQYHHQMQIVISWFEQAAGIGSAKTYTALALQTISKQFRCLKDAIMGQI 325 79********************************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 683 aa Download sequence
MASTYYNGNS EIQGGDGLQT LVLMNPGYVY YPDAQQSPHP QGNNFAFLDS NNTGNNQVNN 60 PHQHGTMSHG PPQPQPHPHA SQTQQFVGIP LSASPPSSVH SQHDVSSLHA FIPRAQYMYS 120 PVEMVSPREV TPFQQGLSLS LSSQQSRYGS HAARVPISPT GDGGGGSTSS ASGVSNTVNG 180 MHNMLLNSKY LKATQEILEE VVNVGKVAVK NSDQLNKNLK TVGSGDGGSS PPVTGEGHET 240 GSKSGGGADL TTAERQEIQM KKAKLINMLD EVEQRYRQYH HQMQIVISWF EQAAGIGSAK 300 TYTALALQTI SKQFRCLKDA IMGQIKAASR SLGEDESLGG GGKGEGSGSR LKFVDNQLRQ 360 QRALQQLGMI QHNAWRPQRG LPERSVSVLR AWLFEHFLHP YGSKPFTKIK LIFFTFNEIS 420 KFRYPKDSDK HMLAKQTGLT RSQVSNWFIN ARVRLWKPMV EEMYLEEIKE QEQNGLEDHK 480 KTKDDQIEEN PSTKQEKSIS PRTNKPENSF MRPPQSVSVS TSVSASPTTT GINFQNPSGF 540 SLIGSLEMEG ITQFSPKKPR NNQNEGFTLT GSNPTDFMGG LGGYPIGEIG RFTTDQFQQQ 600 YSGNGVSLTL GLPHCENISI SGTHQSFLPN QNIQLGRGAE LGEENDYGAM NPPSSSHSAA 660 MYESMNIQNR KRFAAQPLPD FVA

Sequence ? help Back to Top

Protein Sequence Length: 683 aa Download sequence

MASTYYNGNS EIQGGDGLQT LVLMNPGYVY YPDAQQSPHP QGNNFAFLDS NNTGNNQVNN  60
PHQHGTMSHG PPQPQPHPHA SQTQQFVGIP LSASPPSSVH SQHDVSSLHA FIPRAQYMYS  120
PVEMVSPREV TPFQQGLSLS LSSQQSRYGS HAARVPISPT GDGGGGSTSS ASGVSNTVNG  180
MHNMLLNSKY LKATQEILEE VVNVGKVAVK NSDQLNKNLK TVGSGDGGSS PPVTGEGHET  240
GSKSGGGADL TTAERQEIQM KKAKLINMLD EVEQRYRQYH HQMQIVISWF EQAAGIGSAK  300
TYTALALQTI SKQFRCLKDA IMGQIKAASR SLGEDESLGG GGKGEGSGSR LKFVDNQLRQ  360
QRALQQLGMI QHNAWRPQRG LPERSVSVLR AWLFEHFLHP YGSKPFTKIK LIFFTFNEIS  420
KFRYPKDSDK HMLAKQTGLT RSQVSNWFIN ARVRLWKPMV EEMYLEEIKE QEQNGLEDHK  480
KTKDDQIEEN PSTKQEKSIS PRTNKPENSF MRPPQSVSVS TSVSASPTTT GINFQNPSGF  540
SLIGSLEMEG ITQFSPKKPR NNQNEGFTLT GSNPTDFMGG LGGYPIGEIG RFTTDQFQQQ  600
YSGNGVSLTL GLPHCENISI SGTHQSFLPN QNIQLGRGAE LGEENDYGAM NPPSSSHSAA  660
MYESMNIQNR KRFAAQPLPD FVA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35940.1	1e-104	TALE family protein