PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc028864.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

TALE

Protein Properties

Length: 637aa MW: 71617.8 Da PI: 7.2925

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc028864.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	29.4	1.3e-09	472	504	22	54
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRak 54 ++yps +++ LA+++gLt +qV++WF N R + Cse_sc028864.1_g010.1 472 HPYPSDADKHMLATQTGLTRNQVSNWFINARVR 504 89*****************************88 PP
2	BELL	96.1	3e-31	323	392	4	72
BELL 4 elqkkkakLlslleeV.dkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 e q+kkakLl +++eV ++rYkqy +q+q+vissFe+vagl +a+pY+ lAlka+SrhF +k+ i+eq+ Cse_sc028864.1_g010.1 323 EFQRKKAKLLYMQDEVvCRRYKQYLQQMQMVISSFETVAGLSAATPYVCLALKAVSRHFHLVKNVISEQL 392 89*********99549************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 637 aa Download sequence
MEMNNLRVES HVAQKNRRHK LRFQHNSNDL NHQQQPPQDH HQSFSYSHNV FPSEMISSIA 60 RNPHLLLPQG HSYVSHDQDA YSGSGQPERV LMSSSGSQEC NKWKSVASSH QEGANDHWNV 120 VGYSNNVSMN SGSYSYHQDV QQPFYHSNVQ QDHVTIAHPS ARPCWMNNSN SDGSSFLANR 180 IHDHQEQTTQ QALSLSLSSV SQLKDDQPML ESGPKAIKSD LLPNSDPKSI MGVSAFAHRS 240 VGPLGPFTGY ATILKNSKYM KSAQELLNES CDVGYQEMVP TCHEFYTQKI LEDEMSRASD 300 YSGGSEDHIS GRSSSGADSF RPEFQRKKAK LLYMQDEVVC RRYKQYLQQM QMVISSFETV 360 AGLSAATPYV CLALKAVSRH FHLVKNVISE QLSQMRKMVG EGLCSSTTTS SKAFDPNATS 420 TSHLKSVDHR LGKYGGAAGY FSSQQPAWRP QRGLPERAIS VLKTWLFDHF LHPYPSDADK 480 HMLATQTGLT RNQVSNWFIN ARVRIWKPMV EEIHTLETKG LTEQNLTNPQ SECQDPSRMD 540 ISSLSNTQPP ECSRNTGVTL DGPNDQLRDH EKLARPEYQI PLSNMDRLMS IMPYPQATFD 600 ATRLGPVSLT LGLRQNAEHV QQLQQHFGGQ LIHDFVG

Sequence ? help Back to Top

Protein Sequence Length: 637 aa Download sequence

MEMNNLRVES HVAQKNRRHK LRFQHNSNDL NHQQQPPQDH HQSFSYSHNV FPSEMISSIA  60
RNPHLLLPQG HSYVSHDQDA YSGSGQPERV LMSSSGSQEC NKWKSVASSH QEGANDHWNV  120
VGYSNNVSMN SGSYSYHQDV QQPFYHSNVQ QDHVTIAHPS ARPCWMNNSN SDGSSFLANR  180
IHDHQEQTTQ QALSLSLSSV SQLKDDQPML ESGPKAIKSD LLPNSDPKSI MGVSAFAHRS  240
VGPLGPFTGY ATILKNSKYM KSAQELLNES CDVGYQEMVP TCHEFYTQKI LEDEMSRASD  300
YSGGSEDHIS GRSSSGADSF RPEFQRKKAK LLYMQDEVVC RRYKQYLQQM QMVISSFETV  360
AGLSAATPYV CLALKAVSRH FHLVKNVISE QLSQMRKMVG EGLCSSTTTS SKAFDPNATS  420
TSHLKSVDHR LGKYGGAAGY FSSQQPAWRP QRGLPERAIS VLKTWLFDHF LHPYPSDADK  480
HMLATQTGLT RNQVSNWFIN ARVRIWKPMV EEIHTLETKG LTEQNLTNPQ SECQDPSRMD  540
ISSLSNTQPP ECSRNTGVTL DGPNDQLRDH EKLARPEYQI PLSNMDRLMS IMPYPQATFD  600
ATRLGPVSLT LGLRQNAEHV QQLQQHFGGQ LIHDFVG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27990.1	1e-84	TALE family protein