PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc028164.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

WRKY

Protein Properties

Length: 330aa MW: 36322.3 Da PI: 10.3592

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc028164.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	98.4	4.5e-31	257	314	3	59
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D y+WrKYGqK++kgs++pr+YY+C+s gCp++k+ver+ +d ++++tYegeHnh+ Cse_sc028164.1_g030.1 257 DDYSWRKYGQKPIKGSPHPRGYYKCSSLrGCPARKHVERALDDAAMLIVTYEGEHNHS 314 99**********************998**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 330 aa Download sequence
MAVDLMNTST NTLLHTKMEQ INFQEAATAG LQSVENLIRI LSTQQKSKFN DTTSSSSLTA 60 APATDYVAVA DVAVNKFKKF ISLLDRNRTG HARFRRGPAP IKQNKTTLFS VALALEKEKE 120 KEKVYSPAPI QQRMPPVSLV KSGSFDRKEF PVTTINFASS KANSFMSSLT GDSESLQPSM 180 SSSGFQITNL SQVSMSGGQS NMSNSSFKRK CNSMDDSHAK CANSSGRCHC SKKRKSRMKR 240 VVRVPAISMK MADIPPDDYS WRKYGQKPIK GSPHPRGYYK CSSLRGCPAR KHVERALDDA 300 AMLIVTYEGE HNHSHNVNDS PAAIVLESAS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24240.1	4e-70	WRKY family protein